CDS

Accession Number TCMCG057C38989
gbkey CDS
Protein Id XP_018442992.1
Location join(3832849..3833151,3833271..3833336,3833472..3833537,3833626..3833737,3833915..3834270,3834530..3834602,3834687..3834819,3834947..3835079,3835310..3836323,3836701..3837227,3837332..3837604,3837702..3837975)
Gene LOC108814858
GeneID 108814858
Organism Raphanus sativus

Protein

Length 1109aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018587490.1
Definition PREDICTED: telomerase reverse transcriptase isoform X1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category BL
Description Telomerase ribonucleoprotein complex - RNA binding domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03032        [VIEW IN KEGG]
KEGG_ko ko:K11126        [VIEW IN KEGG]
EC 2.7.7.49        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko05165        [VIEW IN KEGG]
ko05166        [VIEW IN KEGG]
ko05200        [VIEW IN KEGG]
ko05225        [VIEW IN KEGG]
ko05226        [VIEW IN KEGG]
map05165        [VIEW IN KEGG]
map05166        [VIEW IN KEGG]
map05200        [VIEW IN KEGG]
map05225        [VIEW IN KEGG]
map05226        [VIEW IN KEGG]
GOs GO:0000333        [VIEW IN EMBL-EBI]
GO:0000723        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003720        [VIEW IN EMBL-EBI]
GO:0003721        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003964        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005697        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006278        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0006997        [VIEW IN EMBL-EBI]
GO:0007000        [VIEW IN EMBL-EBI]
GO:0007004        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010073        [VIEW IN EMBL-EBI]
GO:0010449        [VIEW IN EMBL-EBI]
GO:0010833        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016779        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019827        [VIEW IN EMBL-EBI]
GO:0022622        [VIEW IN EMBL-EBI]
GO:0032200        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034061        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0035266        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0042162        [VIEW IN EMBL-EBI]
GO:0042575        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048364        [VIEW IN EMBL-EBI]
GO:0048507        [VIEW IN EMBL-EBI]
GO:0048589        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050000        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051640        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0060249        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070034        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071897        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098727        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGCGAAAACCTAGACGTAATGTGCCGGAGAGTCTACGGGGGTTATTCGGAGAAAAAGCCAAGAATCTAAAGGACGCTATAGTAGATCTGATTACCCACCGGAGTATCCAGCCGGAGCAGTGCCGATGCAAGGGCCAAGGCTGTCTCGGCTGCAGCCGCGATAAACCGTCGTTTCTGTTGCGTCCCGATGACCCCAACCACTACCGTCAACTTCTTCTCCATCGATGCTTCGTTGTGCTTCACGAACAAGCCCCTCCGCTGCCGAGTTTCTCGCCGACGTCTTGGTGGTCACAGCGAGAGATTGTGGAGAAGGTGATTGAATCTGGAGGTGATAGTGGGAATGTGATATGTGCTAGATATGACAAGTATGAACAGTCTAGTTCTTTTCTGGAGTTGTTGACAACTTCTTCTTGCGAGTTTCTTCTCAACCGGATCGGTCATGATTTAATGGTTTATCTACTACGACACACATCGATATTCTTACCGTTTCAAGGAAAGAATCACCAGCAAGTGTCAGGGCCTCCTCTACGTATCACTCAAAAGGAGACCTTGCCCGTCCACAACAACAAAAGAAAGAGTGACGAGAGCGGGGAACCATCAAAGAAAAGGCAGCGGGTTTCTTATACTGTCAATGACTGCCCTAAGGATGTGTCTGCAGCTGTTACGTCCATAGCTTCTGTGGATGTAGTAGACGAACATAGAGAGGAGAAACCTAAAAAGCGTTTCCGATTGTATCTTAAGCGTCGACGAAAGCAGACAAAGGACAACTGCCCAAAAGTTGACGATGAGGCACCTTGTGTAACTTCTAGTACAAATGTTGAAGCCTCAACTGGGAATGAAGCTGATGGGAGGAATCCGCAAATCAGTATAAGTGGAAGTCTCACTGATTTCACAAAGCAGGCTAAACAGGTGAAAGGAAATAAACATTTCAAGTTTTCCAACTCGGAATATGTTTCAGTTATACCACCAAATCACATTCTGAAAACATTAAAAGCCAACTACTCTGATTCAAAGTCCCTGATGAACCATATATTTGGTGAAGTAAGTGCTTGGTCCGCAGCCCCATCTCATGGCAAAGGCAATTGCCCCAGTGAATCTATTTGCTTGTACCATTCACTGCTCAAGTCTCTTAAAAGTCTAATTGGAAAAACAAAGTCCTCTTATTTGAAAACGTTACTAGATAAACACTGTCCTGTTCTCTTGCCACAAGAGAGTGCGTCCGCAAATGCGGCTTCTCAGAGTTCCTGGAGGCAAAACTCAGATAAGCTGCCTCTGTATTGCACAAAAGACCAAGTAGTTTCCTTTATTTGGGCCATCTGTAGCCACATTATTCCAGAAGGTTTGCTTGGGACCAATCATCAGATGAGAGTGCTTAGGAGTAACATTGCCTGGTTTGTTTCTCGGCGTAGAAATGAGAAATGCACAAATGAGAAATGCACCGTGACGCAATTCTTGCATAAAGTGAAACCATCAGGTTTCCCATTCTTTGCCAGTAAACAGTTATGCTGTATGGTCAACGGACATGCACTCCAGAATGAGTCCATCAGCAGTACACAGCAGGTGCTGTGCACGAAATGGATATCTTGGCTTTTCTTAGAGATTGTCAAGAAATTGGGGCTCTTCAACTTCTATGCCACTGAAAGGCAAGATGGGCGGCAGAACATTTATTACTACCGGAAATGCAACTGGGAGAGGTTAGTGAGCAAAGACATGAGCAAAACCCTTAATGGATATGTCCAAGTGGAGAATGCTGAAGCTGAAATTAGAAGGAAAAAGTTTGAGTTATCGAAGTATAGGTTTCTACCAAAGTCAAATGGTGTGAGGATGCTGTTAGATTTTAGTTCCTCGTCAAGGTCGCCTTCTCTTCGTGATATACATGCCGTTTTGAAGGACATTCAGCTGAAAGAACCAGATGTCCTTGGGTCTTCTGTTTTTGACCATGACGACTTCTACAGAAACCTAGGCCCCTATCTGAAACATTTGAGGAGTCAATCTGGGGAACTTCCTCCTTTGTTCTTGGTGGTTGCAGATGTTCGCAAAGCATTTGATTCGATCGACCAGGGTAAGCTACTTGATATTGTGCAATGTGTCCTGAAAGATGAACATATCTTAAAAAAGTGTAGGCTAATCTGCTGTGGGAAGAGATCACGTTGGGTAAACAATATACTAGTCTCGACTGATAAAAATGATACCGTAGCAAGATTCACATCAACCTTTCCATATAATGGTCTGCAAAGTATCATTGTTGATCAGGGAGAAAACCATCTAGTAAGGAAAAAGGGTCTCATGCAGTGGATCAACGATATGCTAAAGAACAACATGCTGCAAATAGATAAAAACTTCCATGTACAAATAGCAGGAATACCTCAGGGACACAAATTGTCATCTTTGTTATGCTGTTTATACTACGGGCACCTCGAGAGGACTTTTATGTACCCGTTCCTTGACGAATCCTCTGGAGATGCGGAATGCAGTGGAGAGAGAGAGCTAATCACTCCCCCAAGCTATAAGTTACTGAGATTTATCGATGATTACCTCTTTGTGTCTACCTCAAGAGAACAGGCCACTAGATTTTATCAGAGGTTGAAGCAAGGATTCCCAGATTACAACTGCTCGATGAACTACAAGAAATTCTGCATAAACTTCGAAGATGGAGTGGAATCACAGAATTCTTCTAACACTAAAAGGATGTACGTGGGTGATAATGGAGTTTCTTTTATAAGATGGACGGGTTTGCTTATCAATTCCCGCACATTCGAAGTTCAAGTTGACTACACAAGGTACGTGAGTGGCCATATAAGCTCAACCTTCACGGTACCCTGGCAGAACAAACCAGTTGGAAACCTTCGGCATAAATTGTGTTACTTCTTGGTCCCTAAATTGCATCCCATTCTCTTTGACTCAAACATCAACTCGGGAGCAATTGTCAGGTTAAACATCTATCAGATCTTTCTGTTAGCTGCAATGAAGTGTCACTGCTATCTCTACGACCTGGCCCGGTTTTGGAAGCTTCCTCCTCATACTTTGTCCAAATTCATCACAAGATCTATCAGGTACATGTTCAAACTCATACATCGAAGGACGCACAGAATCAACACCGGTTCTAGTTTCAGACCAGTTCTTAAACTGCGCAAAGAAGAAGTGATGTGGCTTGGCTTACACGCTTACATTCAAGTACTGAAGAGGAAACACTCCCGATATCGAACCCTCTTGAATTATTTGGGATCTGCGCTTTCGAAACTGGATGTTCCTCTGGATCTATCGCCGGATCTGGATTATGCAACGAACCGATCAAACTCATCTATCCTGTGGAGACTGAGTTACTGA
Protein:  
MARKPRRNVPESLRGLFGEKAKNLKDAIVDLITHRSIQPEQCRCKGQGCLGCSRDKPSFLLRPDDPNHYRQLLLHRCFVVLHEQAPPLPSFSPTSWWSQREIVEKVIESGGDSGNVICARYDKYEQSSSFLELLTTSSCEFLLNRIGHDLMVYLLRHTSIFLPFQGKNHQQVSGPPLRITQKETLPVHNNKRKSDESGEPSKKRQRVSYTVNDCPKDVSAAVTSIASVDVVDEHREEKPKKRFRLYLKRRRKQTKDNCPKVDDEAPCVTSSTNVEASTGNEADGRNPQISISGSLTDFTKQAKQVKGNKHFKFSNSEYVSVIPPNHILKTLKANYSDSKSLMNHIFGEVSAWSAAPSHGKGNCPSESICLYHSLLKSLKSLIGKTKSSYLKTLLDKHCPVLLPQESASANAASQSSWRQNSDKLPLYCTKDQVVSFIWAICSHIIPEGLLGTNHQMRVLRSNIAWFVSRRRNEKCTNEKCTVTQFLHKVKPSGFPFFASKQLCCMVNGHALQNESISSTQQVLCTKWISWLFLEIVKKLGLFNFYATERQDGRQNIYYYRKCNWERLVSKDMSKTLNGYVQVENAEAEIRRKKFELSKYRFLPKSNGVRMLLDFSSSSRSPSLRDIHAVLKDIQLKEPDVLGSSVFDHDDFYRNLGPYLKHLRSQSGELPPLFLVVADVRKAFDSIDQGKLLDIVQCVLKDEHILKKCRLICCGKRSRWVNNILVSTDKNDTVARFTSTFPYNGLQSIIVDQGENHLVRKKGLMQWINDMLKNNMLQIDKNFHVQIAGIPQGHKLSSLLCCLYYGHLERTFMYPFLDESSGDAECSGERELITPPSYKLLRFIDDYLFVSTSREQATRFYQRLKQGFPDYNCSMNYKKFCINFEDGVESQNSSNTKRMYVGDNGVSFIRWTGLLINSRTFEVQVDYTRYVSGHISSTFTVPWQNKPVGNLRHKLCYFLVPKLHPILFDSNINSGAIVRLNIYQIFLLAAMKCHCYLYDLARFWKLPPHTLSKFITRSIRYMFKLIHRRTHRINTGSSFRPVLKLRKEEVMWLGLHAYIQVLKRKHSRYRTLLNYLGSALSKLDVPLDLSPDLDYATNRSNSSILWRLSY